{
  "_id": "6a1d673d1d7bb097a0a4d31b",
  "Package": "ebvcube",
  "Title": "Working with netCDF for Essential Biodiversity Variables",
  "Version": "0.5.3",
  "Date": "2026-05-26",
  "Authors@R": "c(person(given = \"Emmanuel\",\nfamily = \"Oceguera Conchas\",\nrole = c(\"aut\", \"cre\"),\nemail = \"e.oceguera@idiv.de\",\ncomment = c(ORCID = \"0009-0008-0107-9298\")),\nperson(given = \"Luise\",\nfamily = \"Quoss\",\nrole = c(\"aut\"),\ncomment = c(ORCID = \"0000-0002-9910-1252\")),\nperson(given = \"Nestor\",\nfamily = \"Fernandez\",\nrole = c(\"aut\"),\nemail = \"nestor.fernandez@idiv.de\",\ncomment = c(ORCID = \"0000-0002-9645-8571\")),\nperson(given = \"Christian\",\nfamily = \"Langer\",\nrole = c(\"aut\"),\nemail= \"christian.langer@idiv.de\",\ncomment = c(ORCID = \"0000-0003-1446-3527\")),\nperson(given = \"Jose\",\nfamily = \"Valdez\",\nrole = c(\"aut\"),\nemail=\"jose.valdez@idiv.de\",\ncomment = c(ORCID = \"0000-0003-2690-9952\")),\nperson(given = \"Henrique Miguel\",\nfamily = \"Pereira\",\nrole = c(\"aut\"),\nemail = \"henrique.pereira@idiv.de\",\ncomment = c(ORCID = \"0000-0003-1043-1675\"))\n)",
  "Author": "Emmanuel Oceguera Conchas [aut, cre]\n(<https://orcid.org/0009-0008-0107-9298>), Luise Quoss [aut]\n(<https://orcid.org/0000-0002-9910-1252>), Nestor Fernandez\n[aut] (<https://orcid.org/0000-0002-9645-8571>), Christian\nLanger [aut] (<https://orcid.org/0000-0003-1446-3527>), Jose\nValdez [aut] (<https://orcid.org/0000-0003-2690-9952>),\nHenrique Miguel Pereira [aut]\n(<https://orcid.org/0000-0003-1043-1675>)",
  "Maintainer": "Emmanuel Oceguera Conchas <e.oceguera@idiv.de>",
  "Description": "The concept of Essential Biodiversity Variables (EBV,\n<https://geobon.org/ebvs/what-are-ebvs/>) comes with a data\nstructure based on the Network Common Data Form (netCDF). The\n'ebvcube' 'R' package provides functionality to easily create,\naccess and visualise this data. The EBV netCDFs can be\ndownloaded from the EBV Data Portal: Christian Langer/ iDiv\n(2020) <https://portal.geobon.org/>.",
  "URL": "https://github.com/EBVCube/ebvcube",
  "BugReports": "https://github.com/EBVcube/ebvcube/issues",
  "License": "GPL (>= 3)",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "biocViews": "",
  "SystemRequirements": "GDAL binaries",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nlibicu-dev libnetcdf-dev libssl-dev libproj-dev libsqlite3-dev\nlibudunits2-dev zlib1g-dev",
  "Repository": "https://ebvcube.r-universe.dev",
  "Date/Publication": "2026-06-01 09:49:08 UTC",
  "RemoteUrl": "https://github.com/ebvcube/ebvcube",
  "RemoteRef": "HEAD",
  "RemoteSha": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-01 10:42:57 UTC",
    "User": "root"
  },
  "MD5sum": "a3b3e9f56305e3d21f296afff6b0f5e1",
  "_user": "ebvcube",
  "_type": "src",
  "_file": "ebvcube_0.5.3.tar.gz",
  "_fileid": "df4a0f8dfbba02cd38ecbe11b3eb8bca9632c0d838aff86e532b17079de022d1",
  "_filesize": 2310610,
  "_sha256": "df4a0f8dfbba02cd38ecbe11b3eb8bca9632c0d838aff86e532b17079de022d1",
  "_created": "2026-06-01T10:42:57.000Z",
  "_published": "2026-06-01T11:04:29.195Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78835422656,
      "time": 181,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7329460625"
    },
    {
      "job": 78835422630,
      "time": 184,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329460809"
    },
    {
      "job": 78835422655,
      "time": 192,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7329660438"
    },
    {
      "job": 78835422606,
      "time": 154,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329796221"
    },
    {
      "job": 78834900700,
      "time": 202,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329402025"
    },
    {
      "job": 78835422600,
      "time": 141,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329447339"
    },
    {
      "job": 78835422708,
      "time": 127,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7329443305"
    },
    {
      "job": 78835422694,
      "time": 118,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7329440074"
    },
    {
      "job": 78835422686,
      "time": 129,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7329443915"
    }
  ],
  "_buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/ebvcube/ebvcube",
  "_commit": {
    "id": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
    "author": "E-O-Conchas <e.oceguera@idiv.de>",
    "committer": "E-O-Conchas <e.oceguera@idiv.de>",
    "message": "Merge dev into main for v0.5.3\n",
    "time": 1780307348
  },
  "_maintainer": {
    "name": "Emmanuel Oceguera Conchas",
    "email": "e.oceguera@idiv.de",
    "login": "e-o-conchas",
    "linkedin": "in/emmanuel-oceguera-b2aba5253",
    "description": "",
    "uuid": 113361856
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.2.0",
      "role": "Depends"
    },
    {
      "package": "checkmate",
      "role": "Imports"
    },
    {
      "package": "curl",
      "role": "Imports"
    },
    {
      "package": "DelayedArray",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "HDF5Array",
      "role": "Imports"
    },
    {
      "package": "httr",
      "role": "Imports"
    },
    {
      "package": "jsonlite",
      "role": "Imports"
    },
    {
      "package": "memuse",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "ncdf4",
      "role": "Imports"
    },
    {
      "package": "ncmeta",
      "role": "Imports"
    },
    {
      "package": "reshape2",
      "role": "Imports"
    },
    {
      "package": "rhdf5",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    },
    {
      "package": "terra",
      "role": "Imports"
    },
    {
      "package": "tidyterra",
      "role": "Imports"
    },
    {
      "package": "withr",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "lintr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "ebvcube",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-22",
      "n": 5
    },
    {
      "week": "2025-24",
      "n": 2
    },
    {
      "week": "2025-25",
      "n": 2
    },
    {
      "week": "2025-27",
      "n": 1
    },
    {
      "week": "2025-28",
      "n": 5
    },
    {
      "week": "2025-29",
      "n": 1
    },
    {
      "week": "2025-31",
      "n": 3
    },
    {
      "week": "2025-34",
      "n": 1
    },
    {
      "week": "2025-45",
      "n": 1
    },
    {
      "week": "2026-12",
      "n": 3
    },
    {
      "week": "2026-13",
      "n": 2
    },
    {
      "week": "2026-23",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "0.5.1",
      "date": "2025-06-18"
    },
    {
      "name": "0.5.2",
      "date": "2025-07-29"
    },
    {
      "name": "0.5.3",
      "date": "2026-06-01"
    }
  ],
  "_topics": [
    "biodiversity-standards",
    "essential-biodiversity-variables",
    "netcdf4"
  ],
  "_stars": 10,
  "_contributors": [
    {
      "user": "e-o-conchas",
      "count": 13,
      "uuid": 113361856
    },
    {
      "user": "luisequoss",
      "count": 12,
      "uuid": 52712845
    },
    {
      "user": "wlangera",
      "count": 2,
      "uuid": 60934857
    }
  ],
  "_userbio": {
    "uuid": 150131883,
    "type": "organization",
    "name": "EBVcube"
  },
  "_downloads": {
    "count": 79,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ebvcube"
  },
  "_devurl": "https://github.com/ebvcube/ebvcube",
  "_searchresults": 35,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/ebvcube.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/ebvcube/ebvcube",
  "_realowner": "ebvcube",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2022-11-09"
    },
    {
      "version": "0.1.2",
      "date": "2022-11-24"
    },
    {
      "version": "0.1.3",
      "date": "2023-04-12"
    },
    {
      "version": "0.1.4",
      "date": "2023-04-19"
    },
    {
      "version": "0.1.6",
      "date": "2023-10-11"
    },
    {
      "version": "0.1.7",
      "date": "2024-02-21"
    },
    {
      "version": "0.2.1",
      "date": "2024-06-11"
    },
    {
      "version": "0.2.3",
      "date": "2024-07-10"
    },
    {
      "version": "0.3.1",
      "date": "2024-12-05"
    },
    {
      "version": "0.3.3",
      "date": "2024-12-17"
    },
    {
      "version": "0.4.0",
      "date": "2025-03-06"
    },
    {
      "version": "0.5.0",
      "date": "2025-04-28"
    },
    {
      "version": "0.5.1",
      "date": "2025-06-18"
    },
    {
      "version": "0.5.2",
      "date": "2025-08-01"
    },
    {
      "version": "0.5.3",
      "date": "2026-05-30"
    }
  ],
  "_exports": [
    "ebv_add_data",
    "ebv_analyse",
    "ebv_attribute",
    "ebv_create",
    "ebv_create_taxonomy",
    "ebv_datacubepaths",
    "ebv_download",
    "ebv_map",
    "ebv_metadata",
    "ebv_properties",
    "ebv_read",
    "ebv_read_bb",
    "ebv_read_shp",
    "ebv_resample",
    "ebv_trend",
    "ebv_write"
  ],
  "_datasets": [
    {
      "name": "world_boundaries",
      "title": "Simple outlines of world countries",
      "object": "world_boundaries",
      "class": [
        "data.frame"
      ],
      "fields": [
        "SOVEREIGNT",
        "ISO_A3",
        "ISO_A2",
        "NAME",
        "NAME_LONG",
        "CONTINENT",
        "SUBREGION",
        "INCOME_GRP",
        "ECONOMY",
        "POP_EST",
        "geometry"
      ],
      "rows": 177,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "EBV-netCDF-properties-class",
      "title": "EBV netCDF properties class (S4)",
      "topics": [
        "EBV netCDF properties-class"
      ]
    },
    {
      "page": "ebv_add_data",
      "title": "Add data to your EBV netCDF",
      "topics": [
        "ebv_add_data"
      ]
    },
    {
      "page": "ebv_analyse",
      "title": "Get a simple explorative analysis of an EBV netCDF datacube",
      "topics": [
        "ebv_analyse"
      ]
    },
    {
      "page": "ebv_attribute",
      "title": "Write a new attribute value to an EBV netCDF",
      "topics": [
        "ebv_attribute"
      ]
    },
    {
      "page": "ebv_create",
      "title": "Create an EBV netCDF",
      "topics": [
        "ebv_create"
      ]
    },
    {
      "page": "ebv_create_taxonomy",
      "title": "Create an EBV netCDF with taxonomy",
      "topics": [
        "ebv_create_taxonomy"
      ]
    },
    {
      "page": "ebv_datacubepaths",
      "title": "Get datacubepaths of EBV netCDF",
      "topics": [
        "ebv_datacubepaths"
      ]
    },
    {
      "page": "ebv_download",
      "title": "Download an EBV netCDF file",
      "topics": [
        "ebv_download"
      ]
    },
    {
      "page": "ebv_map",
      "title": "Map plot of an EBV netCDF",
      "topics": [
        "ebv_map"
      ]
    },
    {
      "page": "ebv_metadata",
      "title": "Create the metadata file (json) for the EBV netCDF creation",
      "topics": [
        "ebv_metadata"
      ]
    },
    {
      "page": "ebv_properties",
      "title": "Read properties of EBV netCDF",
      "topics": [
        "ebv_properties"
      ]
    },
    {
      "page": "ebv_read",
      "title": "Read data from an EBV netCDF",
      "topics": [
        "ebv_read"
      ]
    },
    {
      "page": "ebv_read_bb",
      "title": "Read subset (bounding box) of one datacube of an EBV netCDF",
      "topics": [
        "ebv_read_bb"
      ]
    },
    {
      "page": "ebv_read_shp",
      "title": "Read subset (shapefile) of one datacube of an EBV netCDF",
      "topics": [
        "ebv_read_shp"
      ]
    },
    {
      "page": "ebv_resample",
      "title": "Change the resolution of the data of an EBV netCDF",
      "topics": [
        "ebv_resample"
      ]
    },
    {
      "page": "ebv_trend",
      "title": "Plot the trend of an EBV netCDF",
      "topics": [
        "ebv_trend"
      ]
    },
    {
      "page": "ebv_write",
      "title": "Write the extracted data on your disk as a GeoTiff",
      "topics": [
        "ebv_write"
      ]
    },
    {
      "page": "ebvcube",
      "title": "Working with netCDF for Essential Biodiversity Variables",
      "topics": [
        "ebvcube-package",
        "ebvcube"
      ]
    },
    {
      "page": "world_boundaries",
      "title": "Simple outlines of world countries",
      "topics": [
        "world_boundaries"
      ]
    }
  ],
  "_readme": "https://github.com/ebvcube/ebvcube/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "askpass",
    "backports",
    "BiocGenerics",
    "biocmake",
    "CFtime",
    "checkmate",
    "class",
    "classInt",
    "cli",
    "cpp11",
    "curl",
    "data.table",
    "DBI",
    "DelayedArray",
    "dir.expiry",
    "dplyr",
    "e1071",
    "farver",
    "filelock",
    "generics",
    "ggplot2",
    "glue",
    "gtable",
    "h5mread",
    "HDF5Array",
    "httr",
    "IRanges",
    "isoband",
    "jsonlite",
    "KernSmooth",
    "labeling",
    "lattice",
    "lifecycle",
    "magrittr",
    "MASS",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "memuse",
    "mime",
    "ncdf4",
    "ncmeta",
    "openssl",
    "pillar",
    "pkgconfig",
    "plyr",
    "proxy",
    "purrr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "reshape2",
    "rhdf5",
    "rhdf5filters",
    "Rhdf5lib",
    "rlang",
    "RNetCDF",
    "s2",
    "S4Arrays",
    "S4Vectors",
    "S7",
    "scales",
    "sf",
    "SparseArray",
    "stringi",
    "stringr",
    "sys",
    "terra",
    "tibble",
    "tidyr",
    "tidyselect",
    "tidyterra",
    "units",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr",
    "wk",
    "XVector"
  ],
  "_score": 5.623249290397901,
  "_indexed": true,
  "_nocasepkg": "ebvcube",
  "_universes": [
    "ebvcube",
    "e-o-conchas"
  ],
  "_previous": "0.5.2",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.5.3",
      "date": "2026-06-01T10:45:31.000Z",
      "distro": "noble",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "ee872d6958e1be13ba3bb00639d693eeb67625e0ff6ef01295332266e8fe24bc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.5.3",
      "date": "2026-06-01T10:45:32.000Z",
      "distro": "noble",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "8b76fe1f92e98557908f378322144eafc881c0e1da8cedd0aa9ef5873d0d87a7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.5.3",
      "date": "2026-06-01T10:56:04.000Z",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "4603e5164b3d84048833a3793c12a3af07bbb0792b7c0456a4e516b2dbe3a3f9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.5.3",
      "date": "2026-06-01T11:03:18.000Z",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "c16cac015955f64f0c25cd26b2ece4c144b7cc78cea187ea97186a1718125aa5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.5.3",
      "date": "2026-06-01T10:45:34.000Z",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "27378a0e62e3688df00b4a538509066cf319a12fd0535fcf05c1bd8a3c417d7a",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.5.3",
      "date": "2026-06-01T10:44:22.000Z",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "d29dfa845e3e6f186e0040378566992b8817dc61a76f67965140cb850496f57b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.5.3",
      "date": "2026-06-01T10:44:19.000Z",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "e950e1927c2e49052f437ad964f572af6142b94b725e81ff0680b5f7a3b99a1e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.5.3",
      "date": "2026-06-01T10:44:22.000Z",
      "commit": "6f1e86371b58dc01538dcdfef56258f56e3e54d5",
      "fileid": "57d85934cfea814f6c3ac0527d3af2a093264af134995d67425a533018ab7dda",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/ebvcube/actions/runs/26749879976"
    }
  ]
}